EnhancerDB
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  3. rs72314858[chr1:218552829]
Enhancers that have rs72314858[chr1:218552829]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218537025 218560381 enh12670
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs72314858[chr1:218552829]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218552808 218552829 ZNF263 JASPAR yes 35373739
chr1 218552811 218552832 IRF1 JASPAR yes 35373740
chr1 218552811 218552832 ZNF263 JASPAR yes 35373741
chr1 218552813 218552834 IRF1 JASPAR yes 35373742
chr1 218552815 218552836 IRF1 JASPAR yes 35373743
chr1 218552817 218553941 ZNF274 GTRD no Bone Marrow (K562) 107870214
chr1 218552819 218552840 IRF1 JASPAR yes 35373744
chr1 218552821 218552836 PRDM1 JASPAR yes 35373745
chr1 218552821 218552836 STAT2 JASPAR yes 35373746
chr1 218552822 218552836 SPIC JASPAR yes 35373747
chr1 218552822 218552836 STAT1 JASPAR yes 35373748
chr1 218552823 218552844 IRF1 JASPAR yes 35373749
chr1 218552824 218552839 FOXP1 JASPAR yes 35373750
chr1 218552826 218552841 FOXP1 JASPAR yes 35373751
chr1 218552827 218552848 IRF1 JASPAR yes 35373752
chr1 218552828 218552843 FOXP1 JASPAR yes 35373753
chr1 218552829 218552844 FOXP1 JASPAR yes 35373754
Genes associated with rs72314858[chr1:218552829], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More