EnhancerDB
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  3. rs72400827[chr16:11592361]
Enhancers that have rs72400827[chr16:11592361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11585463 11594633 enh16536
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72400827[chr16:11592361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11592348 11592361 DUXA JASPAR yes 9514646
chr16 11592348 11592362 POU4F1 JASPAR yes 9514647
chr16 11592348 11592364 POU4F2 JASPAR yes 9514648
chr16 11592348 11592364 POU4F3 JASPAR yes 9514649
chr16 11592351 11592365 POU4F1 JASPAR yes 9514650
chr16 11592351 11592366 HNF1A JASPAR yes 9514651
chr16 11592352 11592365 HNF1B JASPAR yes 9514652
chr16 11592352 11592366 POU4F1 JASPAR yes 9514653
chr16 11592352 11592368 POU4F2 JASPAR yes 9514654
chr16 11592352 11592368 POU4F3 JASPAR yes 9514655
chr16 11592355 11592365 GSX2 JASPAR yes 9514656
chr16 11592355 11592365 HOXB2 JASPAR yes 9514657
chr16 11592355 11592365 HOXB3 JASPAR yes 9514658
chr16 11592355 11592365 MNX1 JASPAR yes 9514659
chr16 11592355 11592365 POU6F1 JASPAR yes 9514660
chr16 11592355 11592366 HOXA10 JASPAR yes 9514661
chr16 11592356 11592364 LMX1A JASPAR yes 9514662
chr16 11592356 11592364 LMX1B JASPAR yes 9514663
chr16 11592356 11592364 NKX6-1 JASPAR yes 9514664
chr16 11592356 11592364 NKX6-2 JASPAR yes 9514665
chr16 11592356 11592364 VAX1 JASPAR yes 9514666
chr16 11592356 11592364 VAX2 JASPAR yes 9514667
chr16 11592356 11592364 VSX1 JASPAR yes 9514668
chr16 11592356 11592364 VSX2 JASPAR yes 9514669
chr16 11592357 11592368 PHOX2A JASPAR yes 9514670
chr16 11592357 11592368 PROP1 JASPAR yes 9514671
chr16 11592359 11592373 ONECUT3 JASPAR yes 9514672
chr16 11592359 11592374 FOXP1 JASPAR yes 9514673
chr16 11592360 11592374 POU4F1 JASPAR yes 9514674
chr16 11592360 11592375 FOXA1 JASPAR yes 9514675
chr16 11592360 11592376 POU4F2 JASPAR yes 9514676
chr16 11592360 11592376 POU4F3 JASPAR yes 9514677
chr16 11592361 11592372 FOXB1 JASPAR yes 9514678
chr16 11592361 11592372 FOXC1 JASPAR yes 9514679
chr16 11592361 11592372 PROP1 JASPAR yes 9514680
chr16 11592361 11592373 FOXC2 JASPAR yes 9514681
Genes associated with rs72400827[chr16:11592361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More