EnhancerDB
  1. Home
  2. SNP
  3. rs7246554[chr19:2565530]
Enhancers that have rs7246554[chr19:2565530]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs7246554[chr19:2565530]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2565512 2565533 IRF1 JASPAR yes 112075746
chr19 2565513 2565534 IRF1 JASPAR yes 112075747
chr19 2565514 2565534 RREB1 JASPAR yes 112075749
chr19 2565517 2565532 STAT2 JASPAR yes 112075752
chr19 2565518 2565533 FOXP1 JASPAR yes 112075753
chr19 2565518 2565539 IRF1 JASPAR yes 112075754
chr19 2565520 2565535 IRF9 JASPAR yes 112075755
chr19 2565521 2565535 IRF7 JASPAR yes 112075756
chr19 2565522 2565540 IRF2 JASPAR yes 112075757
chr19 2565523 2565535 IRF1 JASPAR yes 112075758
chr19 2565529 2565539 MSC JASPAR yes 112075759
Genes associated with rs7246554[chr19:2565530], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More