EnhancerDB
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  3. rs7258136[chr19:2548183]
Enhancers that have rs7258136[chr19:2548183]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7258136[chr19:2548183]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 21837072
chr19 2545665 2548212 ZNF274 GTRD no Liver (HepG2) 108362370
chr19 2548166 2548187 IRF1 JASPAR yes 112073022
chr19 2548167 2548188 IRF1 JASPAR yes 112073024
chr19 2548169 2548183 IRF7 JASPAR yes 112073027
chr19 2548170 2548185 STAT2 JASPAR yes 112073029
chr19 2548171 2548183 IRF1 JASPAR yes 112073031
chr19 2548175 2548195 RREB1 JASPAR yes 112073032
chr19 2548176 2548190 ONECUT2 JASPAR yes 112073033
chr19 2548176 2548190 ONECUT3 JASPAR yes 112073034
chr19 2548180 2548195 FOXP1 JASPAR yes 112073035
chr19 2548181 2548202 IRF1 JASPAR yes 112073036
Genes associated with rs7258136[chr19:2548183], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More