EnhancerDB
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  3. rs72642665[chr1:12618243]
Enhancers that have rs72642665[chr1:12618243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12597605 12619763 enh11515
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs72642665[chr1:12618243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802127
chr1 12612973 12621161 ZNF274 GTRD no Bone Marrow (K562) 107802128
chr1 12618224 12618244 RREB1 JASPAR yes 26833870
chr1 12618226 12618246 RREB1 JASPAR yes 26833871
chr1 12618228 12618243 FOXP1 JASPAR yes 26833872
chr1 12618230 12618250 RREB1 JASPAR yes 26833873
chr1 12618232 12618247 FOXP1 JASPAR yes 26833874
chr1 12618233 12618244 FOXA1 JASPAR yes 26833875
chr1 12618233 12618248 FOXA1 JASPAR yes 26833876
chr1 12618233 12618254 IRF1 JASPAR yes 26833877
chr1 12618234 12618246 FOXC2 JASPAR yes 26833878
chr1 12618235 12618247 FOXI1 JASPAR yes 26833879
chr1 12618235 12618255 RREB1 JASPAR yes 26833880
chr1 12618238 12618259 IRF1 JASPAR yes 26833881
chr1 12618241 12618256 FOXP1 JASPAR yes 26833882
chr1 12618243 12618258 FOXP1 JASPAR yes 26833883
Genes associated with rs72642665[chr1:12618243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More