EnhancerDB
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  3. rs72648415[chr1:17896945]
Enhancers that have rs72648415[chr1:17896945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs72648415[chr1:17896945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17896937 17896949 TFAP2A JASPAR yes 27103168
chr1 17896937 17896949 TFAP2B JASPAR yes 27103169
chr1 17896937 17896949 TFAP2C JASPAR yes 27103170
chr1 17896937 17896952 TFAP2A JASPAR yes 27103171
chr1 17896937 17896952 TFAP2C JASPAR yes 27103172
chr1 17896938 17896949 TFAP2A JASPAR yes 27103173
Genes associated with rs72648415[chr1:17896945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More