EnhancerDB
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  3. rs72648420[chr1:17904933]
Enhancers that have rs72648420[chr1:17904933]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs72648420[chr1:17904933]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17904928 17904943 SCRT1 JASPAR yes 27104272
chr1 17904929 17904939 MYF6 JASPAR yes 27104273
chr1 17904930 17904943 SCRT2 JASPAR yes 27104274
Genes associated with rs72648420[chr1:17904933], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More