EnhancerDB
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  3. rs72673883[chr1:55327367]
Enhancers that have rs72673883[chr1:55327367]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 55327144 55327486 vista1670
VISTA
Transcript factors that have rs72673883[chr1:55327367]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55326986 55327376 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805359
chr1 55327048 55327418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805362
chr1 55327049 55327409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805363
chr1 55327091 55327407 EBF1 UCSC Txn Factor no Conserved 107805365
chr1 55327092 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805366
chr1 55327096 55327432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805367
chr1 55327098 55327374 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805368
chr1 55327112 55327382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805370
chr1 55327124 55327388 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805371
chr1 55327144 55327368 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805372
chr1 55327192 55327482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805373
chr1 55327243 55327493 RUNX3 UCSC Txn Factor no Conserved 107805374
chr1 55327243 55327493 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805375
chr1 55327363 55327378 RFX5 JASPAR yes 29002092
chr1 55327363 55327378 RFX5 JASPAR yes 118293587
Genes associated with rs72673883[chr1:55327367], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More