EnhancerDB
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  3. rs72720921[chr1:180490153]
Enhancers that have rs72720921[chr1:180490153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs72720921[chr1:180490153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180489779 180490857 TEF1 GTRD no Bone (Osteoblast) 21353313
chr1 180489961 180490396 ZNF274 GTRD no Liver (HepG2) 21353314
chr1 180489961 180490442 ZNF274 GTRD no Bone Marrow (K562) 21353315
chr1 180489963 180490381 ZNF274 GTRD no Cervix (HeLa-S3) 21353316
chr1 180489983 180490429 ZNF274 GTRD no Liver (HepG2) 21353317
chr1 180490024 180490304 ZNF274 GTRD no Liver (HepG2) 21353318
chr1 180490064 180490398 ZNF274 GTRD no Bone Marrow (K562) 21353319
chr1 180490075 180490297 ZNF274 GTRD no Liver (HepG2) 21353320
chr1 180490143 180490159 SOX4 JASPAR yes 33520297
chr1 180490144 180490159 SOX21 JASPAR yes 33520298
chr1 180490144 180490160 SOX4 JASPAR yes 33520299
Genes associated with rs72720921[chr1:180490153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More