EnhancerDB
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  3. rs72727750[chr1:185616935]
Enhancers that have rs72727750[chr1:185616935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs72727750[chr1:185616935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185616758 185617088 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21359471
chr1 185616932 185616943 HOXC11 JASPAR yes 33830290
chr1 185616932 185616943 HOXC12 JASPAR yes 33830291
chr1 185616933 185616943 HOXD11 JASPAR yes 33830292
Genes associated with rs72727750[chr1:185616935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 185703683 186160085 + HMCN1 ENSG00000143341.7 185703683 86748 Lung 0.198819 1654