EnhancerDB
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  3. rs72749511[chr1:223892844]
Enhancers that have rs72749511[chr1:223892844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 223892678 223892997 vista5270
VISTA
Transcript factors that have rs72749511[chr1:223892844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223892496 223893092 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21383856
chr1 223892496 223893092 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107873032
chr1 223892645 223892922 SOX2 GTRD no Neural Stem Cells (H9) 107873033
chr1 223892737 223893085 SOX2 GTRD no Neural Stem Cells (H9) 107873034
chr1 223892742 223892936 SOX2 GTRD no Neural Stem Cells (H9) 107873035
chr1 223892831 223892849 IRF2 JASPAR yes 35670080
chr1 223892831 223892849 IRF2 JASPAR yes 118466677
chr1 223892832 223892853 IRF1 JASPAR yes 35670081
chr1 223892832 223892853 IRF1 JASPAR yes 118466678
chr1 223892834 223892849 PRDM1 JASPAR yes 35670082
chr1 223892834 223892849 PRDM1 JASPAR yes 118466679
chr1 223892836 223892848 IRF1 JASPAR yes 35670083
chr1 223892836 223892848 IRF1 JASPAR yes 118466680
chr1 223892836 223892850 IRF8 JASPAR yes 35670084
chr1 223892836 223892850 IRF8 JASPAR yes 118466681
chr1 223892836 223892851 IRF9 JASPAR yes 35670085
chr1 223892836 223892851 IRF9 JASPAR yes 118466682
Genes associated with rs72749511[chr1:223892844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 223711349 223853436 - CAPN8 ENSG00000203697.7 223853436 39408 Thyroid 2.05232e-11 1874