EnhancerDB
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  3. rs72812822[chr5:173358135]
Enhancers that have rs72812822[chr5:173358135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173338825 173358415 enh22829
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs72812822[chr5:173358135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173358119 173358138 RFX2 JASPAR yes 67923851
chr5 173358123 173358139 RFX2 JASPAR yes 67923854
chr5 173358123 173358139 RFX3 JASPAR yes 67923855
chr5 173358123 173358139 RFX4 JASPAR yes 67923856
chr5 173358123 173358139 RFX5 JASPAR yes 67923857
Genes associated with rs72812822[chr5:173358135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More