EnhancerDB
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  3. rs72823055[chr17:40565916]
Enhancers that have rs72823055[chr17:40565916]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72823055[chr17:40565916]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546941 40565998 ZNF274 GTRD no Blood (GM12878) 108260641
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40557342 40566842 ZNF274 GTRD no Blood (GM12878) 108260644
chr17 40558162 40566880 ZNF274 GTRD no Blood (GM12878) 108260649
chr17 40558305 40566854 ZNF274 GTRD no Blood (GM12878) 108260650
chr17 40558728 40566979 ZNF274 GTRD no Blood (GM12878) 108260653
chr17 40558911 40565955 ZNF274 GTRD no Blood (GM12878) 108260659
chr17 40559208 40565974 ZNF274 GTRD no Blood (GM12878) 108260663
chr17 40559255 40566931 ZNF274 GTRD no Blood (GM12878) 108260665
chr17 40559501 40566636 ZNF274 GTRD no Blood (GM12878) 108260674
chr17 40559586 40565991 ZNF274 GTRD no Blood (GM12878) 108260677
chr17 40559712 40566957 ZNF274 GTRD no Blood (GM12878) 108260684
chr17 40559897 40566684 ZNF274 GTRD no Blood (GM12878) 108260703
chr17 40560022 40565973 ZNF274 GTRD no Blood (GM12878) 108260745
chr17 40560046 40566013 ZNF274 GTRD no Blood (GM12878) 108260755
chr17 40560052 40565941 ZNF274 GTRD no Blood (GM12878) 108260760
chr17 40560118 40565923 ZNF274 GTRD no Blood (GM12878) 108260796
chr17 40560125 40566775 ZNF274 GTRD no Blood (GM12878) 108260799
chr17 40560183 40565990 ZNF274 GTRD no Blood (GM12878) 108260830
chr17 40565906 40565921 RUNX2 JASPAR yes 54303043
chr17 40565908 40565928 RREB1 JASPAR yes 54303044
chr17 40565909 40565920 RUNX1 JASPAR yes 54303045
chr17 40565910 40565920 RUNX3 JASPAR yes 54303046
chr17 40565911 40565920 RUNX2 JASPAR yes 54303047
chr17 40565911 40565931 RREB1 JASPAR yes 54303048
Genes associated with rs72823055[chr17:40565916], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 39775689 39781094 - KRT17 ENSG00000128422.11 39781094 784822 Pancreas 0.355566 15835