EnhancerDB
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  3. rs72842225[chr17:49020921]
Enhancers that have rs72842225[chr17:49020921]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72842225[chr17:49020921]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49020563 49021022 ZNF274 GTRD no Liver (HepG2) 21771438
chr17 49020568 49021052 ZNF274 GTRD no Liver (HepG2) 21771439
chr17 49020573 49021016 ZNF274 GTRD no Liver (HepG2) 21771440
chr17 49020831 49021395 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21771441
chr17 49020837 49021198 ZNF143 GTRD no Epithelial (MCF-7) 21771442
Genes associated with rs72842225[chr17:49020921], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48556161 48563336 + RSAD1 ENSG00000136444.5 48556161 457585 Esophagus 0.0278347 16037