EnhancerDB
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  3. rs72850501[chr2:28860199]
Enhancers that have rs72850501[chr2:28860199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72850501[chr2:28860199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28860191 28860205 ONECUT3 JASPAR yes 72662313
chr2 28860193 28860202 SRY JASPAR yes 72662314
chr2 28860195 28860211 SOX4 JASPAR yes 72662315
chr2 28860196 28860211 SOX21 JASPAR yes 72662316
Genes associated with rs72850501[chr2:28860199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More