EnhancerDB
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  3. rs72857675[chr6:42375417]
Enhancers that have rs72857675[chr6:42375417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42360825 42379595 enh9117
Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr6 42375139 42375533 vista51976
VISTA
Transcript factors that have rs72857675[chr6:42375417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42375225 42375517 RUNX3 UCSC Txn Factor no Conserved 108540261
chr6 42375281 42375521 SPI1 UCSC Txn Factor no Conserved 108540262
chr6 42375416 42375427 FLI1 JASPAR yes 70365227
chr6 42375416 42375427 FLI1 JASPAR yes 101718622
chr6 42375417 42375421 YY1 TRANSFAC yes 70365228
chr6 42375417 42375421 YY1 TRANSFAC yes 101718623
chr6 42375417 42375427 ETV6 JASPAR yes 70365229
chr6 42375417 42375427 ETV6 JASPAR yes 101718624
chr6 42375417 42375428 ETV2 JASPAR yes 70365230
chr6 42375417 42375428 ETV2 JASPAR yes 101718625
chr6 42375417 42375430 ELF1 JASPAR yes 70365231
chr6 42375417 42375430 ELF1 JASPAR yes 101718626
chr6 42375417 42375431 SPI1 JASPAR yes 70365232
chr6 42375417 42375431 SPIC JASPAR yes 70365233
chr6 42375417 42375431 SPI1 JASPAR yes 101718627
chr6 42375417 42375431 SPIC JASPAR yes 101718628
Genes associated with rs72857675[chr6:42375417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More