EnhancerDB
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Enhancers that have rs72874643[chr1:33226683]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33221045 33231075 enh11728
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Muscle (A673)
chr1 33226574 33226719 vista1120
VISTA
Transcript factors that have rs72874643[chr1:33226683]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33226275 33226765 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802774
chr1 33226675 33226685 SP1 JASPAR yes 28006572
chr1 33226675 33226685 SP1 JASPAR yes 118268571
chr1 33226676 33226691 TFAP2C JASPAR yes 28006573
chr1 33226676 33226691 TFAP2C JASPAR yes 118268572
chr1 33226677 33226697 TP53 JASPAR yes 28006574
chr1 33226677 33226697 TP53 JASPAR yes 118268573
chr1 33226678 33226690 INSM1 JASPAR yes 28006575
chr1 33226678 33226690 INSM1 JASPAR yes 118268574
chr1 33226679 33226690 TFAP2A JASPAR yes 28006576
chr1 33226679 33226690 TFAP2B JASPAR yes 28006577
chr1 33226679 33226690 TFAP2C JASPAR yes 28006578
chr1 33226679 33226690 TFAP2A JASPAR yes 118268575
chr1 33226679 33226690 TFAP2B JASPAR yes 118268576
chr1 33226679 33226690 TFAP2C JASPAR yes 118268577
chr1 33226680 33226689 TFAP2A JASPAR yes 28006579
chr1 33226680 33226689 TFAP2A JASPAR yes 118268578
Genes associated with rs72874643[chr1:33226683], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More