EnhancerDB
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  3. rs72880846[chr1:27468070]
Enhancers that have rs72880846[chr1:27468070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27456674 27477960 enh171
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs72880846[chr1:27468070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27468064 27468077 EOMES JASPAR yes 27681086
chr1 27468066 27468436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802570
chr1 27468067 27468077 TBX21 JASPAR yes 27681087
chr1 27468068 27468076 MGA JASPAR yes 27681088
chr1 27468068 27468076 TBX15 JASPAR yes 27681089
chr1 27468068 27468076 TBX1 JASPAR yes 27681090
chr1 27468068 27468076 TBX4 JASPAR yes 27681091
chr1 27468068 27468076 TBX5 JASPAR yes 27681092
Genes associated with rs72880846[chr1:27468070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More