EnhancerDB
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  3. rs72884658[chr1:27853965]
Enhancers that have rs72884658[chr1:27853965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 27853337 27854089 vista918
VISTA
Transcript factors that have rs72884658[chr1:27853965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27853961 27853975 PLAG1 JASPAR yes 27705364
chr1 27853961 27853975 PLAG1 JASPAR yes 118258060
chr1 27853963 27853978 NR2C2 JASPAR yes 27705365
chr1 27853963 27853978 NR2C2 JASPAR yes 118258061
chr1 27853964 27853978 RXRB JASPAR yes 27705366
chr1 27853964 27853978 RXRB JASPAR yes 118258062
Genes associated with rs72884658[chr1:27853965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More