EnhancerDB
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  3. rs72884699[chr1:27883939]
Enhancers that have rs72884699[chr1:27883939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27883449 27884140 vista923
VISTA
Transcript factors that have rs72884699[chr1:27883939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27881821 27888089 ZNF274 GTRD no Blood (GM12878) 107802589
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27883931 27883941 SP1 JASPAR yes 27708745
chr1 27883931 27883941 SP1 JASPAR yes 118258369
chr1 27883935 27883946 E2F4 JASPAR yes 27708746
chr1 27883935 27883946 E2F4 JASPAR yes 118258370
chr1 27883937 27883947 SP1 JASPAR yes 27708747
chr1 27883937 27883947 SP1 JASPAR yes 118258371
chr1 27883938 27883944 SP1 TRANSFAC yes 27708748
chr1 27883938 27883944 SP1 TRANSFAC yes 118258372
chr1 27883938 27883948 SP1 JASPAR yes 27708749
chr1 27883938 27883948 SP1 JASPAR yes 118258373
Genes associated with rs72884699[chr1:27883939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More