EnhancerDB
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  3. rs72896094[chr1:52110450]
Enhancers that have rs72896094[chr1:52110450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 52110368 52110491 vista1582
VISTA
Transcript factors that have rs72896094[chr1:52110450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52110167 52110712 ZNF274 GTRD no Bone Marrow (K562) 107803595
chr1 52110186 52110630 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803597
chr1 52110193 52110569 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803598
chr1 52110233 52110573 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803599
chr1 52110238 52110558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803600
chr1 52110239 52110520 STAT3 UCSC Txn Factor no Conserved 107803601
chr1 52110254 52110520 ZNF274 GTRD no Blood (GM12878) 107803602
chr1 52110264 52110544 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107803603
chr1 52110284 52110544 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107803604
chr1 52110322 52110619 ZNF274 GTRD no Blood (GM12878) 107803605
chr1 52110327 52110582 ZNF274 GTRD no Bone Marrow (K562) 107803606
chr1 52110335 52110484 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107803607
chr1 52110392 52110879 ZNF274 GTRD no Bone Marrow (K562) 107803608
chr1 52110437 52110452 HNF4A JASPAR yes 28858824
chr1 52110437 52110452 HNF4A JASPAR yes 118289749
chr1 52110444 52110453 THAP1 JASPAR yes 28858825
chr1 52110444 52110453 THAP1 JASPAR yes 118289750
Genes associated with rs72896094[chr1:52110450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More