EnhancerDB
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  3. rs72927819[chr1:2176202]
Enhancers that have rs72927819[chr1:2176202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72927819[chr1:2176202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2175546 2181036 ZNF274 GTRD no Bone Marrow (K562) 107801815
chr1 2176188 2176202 FOXF2 JASPAR yes 26226193
chr1 2176189 2176204 FOXA1 JASPAR yes 26226196
chr1 2176190 2176202 FOXC2 JASPAR yes 26226199
chr1 2176190 2176204 POU1F1 JASPAR yes 26226200
chr1 2176191 2176202 FOXP2 JASPAR yes 26226201
chr1 2176191 2176203 FOXI1 JASPAR yes 26226202
chr1 2176191 2176203 POU3F1 JASPAR yes 26226203
chr1 2176191 2176203 POU3F2 JASPAR yes 26226204
chr1 2176191 2176204 POU3F3 JASPAR yes 26226205
chr1 2176192 2176204 POU2F1 JASPAR yes 26226206
chr1 2176194 2176202 FOXL1 JASPAR yes 26226208
Genes associated with rs72927819[chr1:2176202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More