EnhancerDB
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  3. rs72977562[chr19:1180565]
Enhancers that have rs72977562[chr19:1180565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1174025 1184042 enh17839
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Esophagus Stomach Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs72977562[chr19:1180565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1180132 1181012 ZNF143 GTRD no Epithelial (MCF-7) 21831596
chr19 1180180 1180876 ZNF143 GTRD no Epithelial (MCF-7) 21831597
chr19 1180218 1181175 ZNF143 GTRD no Epithelial (MCF-7) 21831598
chr19 1180225 1180901 ZNF143 GTRD no Epithelial (MCF-7) 21831599
chr19 1180259 1180875 ZNF143 GTRD no Epithelial (MCF-7) 21831600
chr19 1180288 1180904 ZNF143 GTRD no Epithelial (MCF-7) 21831601
chr19 1180297 1180844 ZNF143 GTRD no Epithelial (MCF-7) 21831602
chr19 1180317 1180973 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21831603
chr19 1180320 1180848 ZNF143 GTRD no Epithelial (MCF-7) 21831604
chr19 1180320 1180868 ZNF143 GTRD no Epithelial (MCF-7) 21831605
chr19 1180329 1180866 ZNF143 GTRD no Epithelial (MCF-7) 21831606
chr19 1180332 1180870 ZNF143 GTRD no Epithelial (MCF-7) 21831607
chr19 1180332 1181085 ZNF143 GTRD no Epithelial (MCF-7) 21831608
chr19 1180343 1180934 ZNF143 GTRD no Epithelial (MCF-7) 21831609
chr19 1180354 1181097 ZNF143 GTRD no Epithelial (MCF-7) 21831610
chr19 1180375 1180947 ZNF143 GTRD no Epithelial (MCF-7) 21831611
chr19 1180395 1180705 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21831612
chr19 1180480 1180950 ZNF143 GTRD no Epithelial (MCF-7) 21831613
chr19 1180531 1180851 ZNF143 GTRD no Epithelial (MCF-7) 21831614
chr19 1180544 1180565 ZNF263 JASPAR yes 111999113
chr19 1180553 1180567 TLX1 JASPAR yes 111999115
chr19 1180562 1180583 IRF1 JASPAR yes 111999116
chr19 1180564 1180575 ELK4 JASPAR yes 111999117
chr19 1180564 1180575 FLI1 JASPAR yes 111999118
chr19 1180564 1180577 ELF3 JASPAR yes 111999119
chr19 1180564 1180579 STAT2 JASPAR yes 111999120
chr19 1180565 1180575 ELK1 JASPAR yes 111999121
chr19 1180565 1180575 ELK3 JASPAR yes 111999122
chr19 1180565 1180575 ERF JASPAR yes 111999123
chr19 1180565 1180575 ERG JASPAR yes 111999124
chr19 1180565 1180575 ETS1 JASPAR yes 111999125
chr19 1180565 1180575 ETV1 JASPAR yes 111999126
chr19 1180565 1180575 ETV3 JASPAR yes 111999127
chr19 1180565 1180575 ETV4 JASPAR yes 111999128
chr19 1180565 1180575 ETV6 JASPAR yes 111999129
chr19 1180565 1180575 FEV JASPAR yes 111999130
chr19 1180565 1180575 FLI1 JASPAR yes 111999131
chr19 1180565 1180575 GABPA JASPAR yes 111999132
chr19 1180565 1180576 ELF5 JASPAR yes 111999133
chr19 1180565 1180576 ETV2 JASPAR yes 111999134
chr19 1180565 1180576 SPDEF JASPAR yes 111999135
chr19 1180565 1180577 EHF JASPAR yes 111999136
chr19 1180565 1180577 ELF1 JASPAR yes 111999137
chr19 1180565 1180577 ELF4 JASPAR yes 111999138
chr19 1180565 1180578 ELF1 JASPAR yes 111999139
chr19 1180565 1180579 SPI1 JASPAR yes 111999140
chr19 1180565 1180579 SPIC JASPAR yes 111999141
Genes associated with rs72977562[chr19:1180565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More