EnhancerDB
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  3. rs72978001[chr2:238104120]
Enhancers that have rs72978001[chr2:238104120]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238097785 238124624 enh19388
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673) Heart
Transcript factors that have rs72978001[chr2:238104120]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238104108 238104126 ESR2 JASPAR yes 82090988
chr2 238104109 238104126 ESR1 JASPAR yes 82090989
chr2 238104110 238104125 ESR2 JASPAR yes 82090990
chr2 238104111 238104121 MAX JASPAR yes 82090991
chr2 238104111 238104122 USF1 JASPAR yes 82090992
chr2 238104111 238104122 USF2 JASPAR yes 82090993
chr2 238104112 238104122 TFEB JASPAR yes 82090994
chr2 238104112 238104122 TFEC JASPAR yes 82090995
chr2 238104119 238104131 TFAP2A JASPAR yes 82090996
chr2 238104119 238104131 TFAP2B JASPAR yes 82090997
chr2 238104119 238104131 TFAP2C JASPAR yes 82090998
chr2 238104119 238104134 TFAP2A JASPAR yes 82090999
chr2 238104119 238104134 TFAP2C JASPAR yes 82091000
chr2 238104120 238104131 TFAP2A JASPAR yes 82091001
Genes associated with rs72978001[chr2:238104120], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More