EnhancerDB
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  3. rs72997403[chr19:13963063]
Enhancers that have rs72997403[chr19:13963063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs72997403[chr19:13963063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961555 13963254 TCF7L2 GTRD no Colon (HCT116) 21852649
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961785 13963314 TCF7L2 GTRD no Colon (HCT116) 21852662
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13961916 13963237 TCF7L2 GTRD no Colon (HCT116) 21852677
chr19 13962152 13963540 ZNF274 GTRD no Bone Marrow (K562) 21852723
chr19 13962301 13963257 TCF7L2 GTRD no Colon (HCT116) 21852726
chr19 13962322 13963374 TCF7L2 GTRD no Colon (HCT116) 21852727
chr19 13962599 13964143 TCF7L2 GTRD no Colon (HCT116) 21852730
chr19 13962674 13963833 ZNF274 GTRD no Blood (GM12878) 21852731
chr19 13962910 13964136 ZNF143 GTRD no Epithelial (MCF-7) 21852732
chr19 13962984 13963899 TCF7L2 GTRD no Colon (HCT116) 21852733
chr19 13962999 13964156 ZNF274 GTRD no Bone Marrow (K562) 21852734
Genes associated with rs72997403[chr19:13963063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 13842574 13874110 + CCDC130 ENSG00000104957.9 13842574 88953 Heart 0.207877 17118
chr19 14625582 14640582 - DNAJB1 ENSG00000132002.3 14640582 662519 Adrenal 0.123971 17143