EnhancerDB
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  3. rs729999[chr11:19977718]
Enhancers that have rs729999[chr11:19977718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs729999[chr11:19977718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19977704 19977718 TLX1 JASPAR yes 37818948
chr11 19977705 19977719 TLX1 JASPAR yes 37818949
chr11 19977708 19977723 NFYB JASPAR yes 37818950
chr11 19977715 19977719 H1TF2 TRANSFAC yes 37818951
chr11 19977715 19977719 NFE TRANSFAC yes 37818952
chr11 19977715 19977719 SRF TRANSFAC yes 37818953
Genes associated with rs729999[chr11:19977718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More