EnhancerDB
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  3. rs73007539[chr19:10858640]
Enhancers that have rs73007539[chr19:10858640]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs73007539[chr19:10858640]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10858627 10858642 HNF4G JASPAR yes 112435553
chr19 10858628 10858642 NR2F1 JASPAR yes 112435554
chr19 10858634 10858649 TFAP2A JASPAR yes 112435556
chr19 10858637 10858649 TFAP2A JASPAR yes 112435557
chr19 10858637 10858649 TFAP2B JASPAR yes 112435558
chr19 10858637 10858649 TFAP2C JASPAR yes 112435559
chr19 10858637 10858652 TFAP2A JASPAR yes 112435560
chr19 10858637 10858652 TFAP2C JASPAR yes 112435561
chr19 10858638 10858647 TFAP2A JASPAR yes 112435562
chr19 10858639 10858648 TFAP2A JASPAR yes 112435563
Genes associated with rs73007539[chr19:10858640], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More