EnhancerDB
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  3. rs730818[chr17:42872361]
Enhancers that have rs730818[chr17:42872361]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42867613 42875555 enh17184
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr17 42872286 42872458 vista24899
VISTA
Transcript factors that have rs730818[chr17:42872361]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42871585 42873403 ZNF274 GTRD no Liver (HepG2) 108263366
chr17 42871657 42873832 ZNF274 GTRD no Liver (HepG2) 108263367
chr17 42871934 42873794 ZNF274 GTRD no Liver (HepG2) 108263368
chr17 42871981 42873925 ZNF274 GTRD no Liver (HepG2) 108263369
chr17 42872035 42873674 ZNF274 GTRD no Liver (HepG2) 108263370
chr17 42872047 42872620 ZNF274 GTRD no Liver (HepG2) 108263371
chr17 42872055 42872755 ZNF274 GTRD no Liver (HepG2) 108263372
chr17 42872062 42872675 ZNF274 GTRD no Liver (HepG2) 108263373
chr17 42872101 42872523 ZNF274 GTRD no Liver (HepG2) 108263374
chr17 42872115 42873833 ZNF274 GTRD no Liver (HepG2) 108263375
chr17 42872191 42872655 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21762973
chr17 42872191 42872655 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108263376
chr17 42872203 42872647 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108263377
chr17 42872216 42872782 ZNF274 GTRD no Bone Marrow (K562) 108263378
chr17 42872216 42872846 ZNF274 GTRD no Liver (HepG2) 108263379
chr17 42872225 42872786 TCF7L2 GTRD no Colon (HCT116) 21762974
chr17 42872225 42872786 TCF7L2 GTRD no Colon (HCT116) 108263380
chr17 42872226 42872964 TCF7L2 GTRD no Colon (HCT116) 21762975
chr17 42872226 42872964 TCF7L2 GTRD no Colon (HCT116) 108263381
chr17 42872235 42872591 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108263382
chr17 42872242 42872652 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263383
chr17 42872250 42872686 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108263384
chr17 42872265 42872585 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762976
chr17 42872265 42872585 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263385
chr17 42872268 42872644 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762977
chr17 42872268 42872644 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263386
chr17 42872273 42872537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21762978
chr17 42872273 42872537 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263387
chr17 42872286 42872562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108263388
chr17 42872289 42872760 TCF7L2 GTRD no Colon (HCT116) 21762979
chr17 42872289 42872760 TCF7L2 GTRD no Colon (HCT116) 108263389
chr17 42872289 42872801 ZNF274 GTRD no Liver (HepG2) 108263390
chr17 42872316 42872572 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108263391
chr17 42872319 42872595 SPI1 UCSC Txn Factor no Conserved 108263392
chr17 42872319 42872595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108263393
chr17 42872348 42872520 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108263394
chr17 42872350 42872362 INSM1 JASPAR yes 21243991
chr17 42872350 42872362 INSM1 JASPAR yes 54414362
chr17 42872355 42872362 SP1 TRANSFAC yes 21243992
chr17 42872355 42872362 SP1 TRANSFAC yes 54414363
chr17 42872355 42872365 SP1 JASPAR yes 21243993
chr17 42872355 42872365 SP1 JASPAR yes 54414364
chr17 42872356 42872367 E2F1 JASPAR yes 21243994
chr17 42872356 42872367 E2F1 JASPAR yes 54414365
chr17 42872357 42872362 SP1 TRANSFAC yes 21243995
chr17 42872357 42872362 SP1 TRANSFAC yes 54414366
chr17 42872357 42872368 E2F4 JASPAR yes 21243996
chr17 42872357 42872368 E2F6 JASPAR yes 21243997
chr17 42872357 42872368 E2F4 JASPAR yes 54414367
chr17 42872357 42872368 E2F6 JASPAR yes 54414368
chr17 42872358 42872363 SP1 TRANSFAC yes 21243998
chr17 42872358 42872363 SP1 TRANSFAC yes 54414369
Genes associated with rs730818[chr17:42872361], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 42927311 42977030 - EFTUD2 ENSG00000108883.8 42977030 54950 Esophagus 0.0010094 15936