EnhancerDB
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  3. rs73101494[chr12:52538461]
Enhancers that have rs73101494[chr12:52538461]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs73101494[chr12:52538461]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52538139 52539820 ZBTB33 GTRD no Lung (A549) 108033090
chr12 52538170 52539881 ZBTB33 GTRD no Lung (A549) 108033091
chr12 52538447 52538461 GLIS3 JASPAR yes 120921463
chr12 52538454 52538463 HiNF-C TRANSFAC yes 120921464
chr12 52538454 52538464 SP1 JASPAR yes 120921465
chr12 52538455 52538461 SP1 TRANSFAC yes 120921466
chr12 52538456 52538461 SP1 TRANSFAC yes 120921467
chr12 52538457 52538462 SP1 TRANSFAC yes 120921468
chr12 52538457 52538463 SP1 TRANSFAC yes 120921469
chr12 52538460 52538465 SP1 TRANSFAC yes 120921470
Genes associated with rs73101494[chr12:52538461], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More