EnhancerDB
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  3. rs73117154[chr12:50923373]
Enhancers that have rs73117154[chr12:50923373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs73117154[chr12:50923373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 21545030
chr12 50923334 50925850 ZNF274 GTRD no Blood (GM12878) 108031198
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50923373 50923393 RREB1 JASPAR yes 120839032
Genes associated with rs73117154[chr12:50923373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More