EnhancerDB
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  3. rs7315889[chr12:52611017]
Enhancers that have rs7315889[chr12:52611017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7315889[chr12:52611017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52610426 52611030 TCF7L2 GTRD no Colon (HCT116) 21546810
chr12 52610459 52611030 ZNF143 GTRD no Epithelial (MCF-7) 21546811
chr12 52610499 52611032 ZNF143 GTRD no Epithelial (MCF-7) 21546813
chr12 52610532 52611436 ZNF143 GTRD no Epithelial (MCF-7) 21546814
chr12 52610843 52611393 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546816
chr12 52610921 52611377 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546817
chr12 52610932 52611308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546818
chr12 52610940 52611410 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21546819
chr12 52610941 52611517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546820
chr12 52610945 52611441 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546821
chr12 52610959 52611475 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546822
chr12 52610975 52611445 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546823
chr12 52610981 52611511 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546824
chr12 52610996 52611017 ZNF263 JASPAR yes 120929346
chr12 52610999 52611020 ZNF263 JASPAR yes 120929349
chr12 52611000 52611021 ZNF263 JASPAR yes 120929351
chr12 52611002 52611266 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546825
chr12 52611003 52611024 ZNF263 JASPAR yes 120929352
chr12 52611004 52611025 ZNF263 JASPAR yes 120929354
chr12 52611007 52611017 SP1 JASPAR yes 120929356
chr12 52611009 52611239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546826
chr12 52611013 52611034 ZNF263 JASPAR yes 120929357
chr12 52611016 52611037 ZNF263 JASPAR yes 120929358
Genes associated with rs7315889[chr12:52611017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More