EnhancerDB
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  3. rs73200061[chr3:123323574]
Enhancers that have rs73200061[chr3:123323574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 123311925 123328095 enh7496
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs73200061[chr3:123323574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 123323562 123323577 STAT2 JASPAR yes 5329523
chr3 123323570 123323581 DUX4 JASPAR yes 5329524
chr3 123323570 123323581 PHOX2A JASPAR yes 5329525
chr3 123323570 123323581 PROP1 JASPAR yes 5329526
chr3 123323573 123323583 ALX3 JASPAR yes 5329527
chr3 123323573 123323583 EMX1 JASPAR yes 5329528
chr3 123323573 123323583 EMX2 JASPAR yes 5329529
chr3 123323573 123323583 EN2 JASPAR yes 5329530
chr3 123323573 123323583 EVX1 JASPAR yes 5329531
chr3 123323573 123323583 EVX2 JASPAR yes 5329532
chr3 123323573 123323583 GBX2 JASPAR yes 5329533
chr3 123323573 123323583 HOXA2 JASPAR yes 5329534
chr3 123323573 123323583 HOXB2 JASPAR yes 5329535
chr3 123323573 123323583 HOXB3 JASPAR yes 5329536
chr3 123323573 123323583 MEOX1 JASPAR yes 5329537
chr3 123323573 123323583 MEOX2 JASPAR yes 5329538
chr3 123323573 123323583 MNX1 JASPAR yes 5329539
chr3 123323573 123323583 NOTO JASPAR yes 5329540
chr3 123323574 123323582 LMX1A JASPAR yes 5329541
chr3 123323574 123323582 LMX1B JASPAR yes 5329542
chr3 123323574 123323582 NKX6-1 JASPAR yes 5329543
chr3 123323574 123323582 NKX6-2 JASPAR yes 5329544
chr3 123323574 123323582 PDX1 JASPAR yes 5329545
chr3 123323574 123323582 VAX1 JASPAR yes 5329546
chr3 123323574 123323582 VAX2 JASPAR yes 5329547
chr3 123323574 123323582 VSX1 JASPAR yes 5329548
Genes associated with rs73200061[chr3:123323574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More