EnhancerDB
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  3. rs73201961[chr12:116830960]
Enhancers that have rs73201961[chr12:116830960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116794611 116846695 enh15026
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs73201961[chr12:116830960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116830955 116830971 SOX4 JASPAR yes 123989376
chr12 116830956 116830971 SOX21 JASPAR yes 123989377
chr12 116830959 116830973 IRF8 JASPAR yes 123989378
Genes associated with rs73201961[chr12:116830960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 117176096 117291436 + RNFT2 ENSG00000135119.10 117176096 345136 Uterus 0.396496 12576