EnhancerDB
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  3. rs73307505[chr12:52549852]
Enhancers that have rs73307505[chr12:52549852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs73307505[chr12:52549852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52549848 52549863 SCRT1 JASPAR yes 120923125
chr12 52549849 52549859 ID4 JASPAR yes 120923126
chr12 52549849 52549859 TCF3 JASPAR yes 120923127
chr12 52549849 52549859 TCF4 JASPAR yes 120923128
chr12 52549850 52549859 SNAI2 JASPAR yes 120923129
chr12 52549850 52549863 SCRT2 JASPAR yes 120923130
chr12 52549851 52549856 USF2 TRANSFAC yes 120923131
Genes associated with rs73307505[chr12:52549852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More