EnhancerDB
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  3. rs7342827[chr17:49018559]
Enhancers that have rs7342827[chr17:49018559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7342827[chr17:49018559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49017994 49019671 ZNF274 GTRD no Liver (HepG2) 21771413
chr17 49018069 49018819 ZNF274 GTRD no Cervix (HeLa-S3) 21771414
chr17 49018272 49018587 ZNF143 GTRD no Epithelial (MCF-7) 21771416
chr17 49018555 49018575 TP63 JASPAR yes 54736872
chr17 49018556 49018574 TP53 JASPAR yes 54736873
chr17 49018556 49018574 TP63 JASPAR yes 54736874
chr17 49018557 49018572 TP53 JASPAR yes 54736875
Genes associated with rs7342827[chr17:49018559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More