EnhancerDB
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  3. rs73511578[chr19:13961830]
Enhancers that have rs73511578[chr19:13961830]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73511578[chr19:13961830]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961058 13961832 ZNF143 GTRD no Epithelial (MCF-7) 21852598
chr19 13961269 13962275 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852628
chr19 13961317 13961973 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852635
chr19 13961355 13961931 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852639
chr19 13961436 13961960 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852642
chr19 13961445 13961886 ZNF274 GTRD no Bone Marrow (K562) 21852643
chr19 13961446 13961950 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852645
chr19 13961458 13961900 ZNF143 GTRD no Epithelial (MCF-7) 21852646
chr19 13961503 13961896 ZNF143 GTRD no Epithelial (MCF-7) 21852647
chr19 13961538 13961848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852648
chr19 13961555 13963254 TCF7L2 GTRD no Colon (HCT116) 21852649
chr19 13961577 13962181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852650
chr19 13961642 13962108 ZNF274 GTRD no Blood (GM12878) 21852651
chr19 13961671 13962247 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852652
chr19 13961686 13961962 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852653
chr19 13961693 13962353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852654
chr19 13961695 13962011 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852655
chr19 13961721 13962125 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852656
chr19 13961727 13962035 ZNF274 GTRD no Blood (GM12878) 21852657
chr19 13961742 13962404 ZNF274 GTRD no Blood (GM12878) 21852658
chr19 13961755 13962405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852659
chr19 13961768 13962448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852660
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961785 13963314 TCF7L2 GTRD no Colon (HCT116) 21852662
chr19 13961799 13962403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852663
chr19 13961802 13962186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852664
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13961828 13961839 FOXA1 JASPAR yes 112538386
chr19 13961830 13961842 FOXI1 JASPAR yes 112538387
Genes associated with rs73511578[chr19:13961830], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 14042000 14064204 - PODNL1 ENSG00000132000.7 14064204 80170 Esophagus 0.0464546 17126