EnhancerDB
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  3. rs73549970[chr19:6093060]
Enhancers that have rs73549970[chr19:6093060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs73549970[chr19:6093060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6091355 6093402 ZNF274 GTRD no Bone Marrow (K562) 21844541
chr19 6091355 6093402 ZNF274 GTRD no Bone Marrow (K562) 108377067
chr19 6091485 6093193 ZNF274 GTRD no Bone Marrow (K562) 21844543
chr19 6091485 6093193 ZNF274 GTRD no Bone Marrow (K562) 108377069
chr19 6091627 6093166 P63 GTRD no Skin (Keratinocyte) 21844544
chr19 6091627 6093166 P63 GTRD no Skin (Keratinocyte) 108377070
chr19 6091671 6093319 ZNF274 GTRD no Bone Marrow (K562) 21844545
chr19 6091671 6093319 ZNF274 GTRD no Bone Marrow (K562) 108377071
chr19 6091811 6093150 ZNF274 GTRD no Bone Marrow (K562) 21844547
chr19 6091811 6093150 ZNF274 GTRD no Bone Marrow (K562) 108377073
chr19 6091831 6093083 ZNF274 GTRD no Bone Marrow (K562) 21844548
chr19 6091831 6093083 ZNF274 GTRD no Bone Marrow (K562) 108377074
chr19 6091969 6093104 P63 GTRD no Skin (Keratinocyte) 21844550
chr19 6091969 6093104 P63 GTRD no Skin (Keratinocyte) 108377076
chr19 6092025 6093063 P63 GTRD no Skin (Keratinocyte) 21844554
chr19 6092025 6093063 P63 GTRD no Skin (Keratinocyte) 108377080
chr19 6092066 6093136 P63 GTRD no Skin (Keratinocyte) 21844555
chr19 6092066 6093136 P63 GTRD no Skin (Keratinocyte) 108377081
chr19 6092103 6093167 ZNF274 GTRD no Bone Marrow (K562) 21844557
chr19 6092103 6093167 ZNF274 GTRD no Bone Marrow (K562) 108377083
chr19 6092105 6093161 TCF7L2 GTRD no Colon (HCT116) 21844558
chr19 6092105 6093161 TCF7L2 GTRD no Colon (HCT116) 108377084
chr19 6092146 6093229 ZNF274 GTRD no Bone Marrow (K562) 21844564
chr19 6092146 6093229 ZNF274 GTRD no Bone Marrow (K562) 108377090
chr19 6092150 6093204 TCF7L2 GTRD no Colon (HCT116) 21844565
chr19 6092150 6093204 TCF7L2 GTRD no Colon (HCT116) 108377091
chr19 6092153 6093290 ZNF274 GTRD no Bone Marrow (K562) 21844566
chr19 6092153 6093290 ZNF274 GTRD no Bone Marrow (K562) 108377092
chr19 6092159 6093218 ZNF274 GTRD no Bone Marrow (K562) 21844567
chr19 6092159 6093218 ZNF274 GTRD no Bone Marrow (K562) 108377093
chr19 6092170 6093067 ZNF274 GTRD no Bone Marrow (K562) 21844569
chr19 6092170 6093067 ZNF274 GTRD no Bone Marrow (K562) 108377095
chr19 6092181 6093370 ZNF274 GTRD no Bone Marrow (K562) 21844575
chr19 6092181 6093370 ZNF274 GTRD no Bone Marrow (K562) 108377101
chr19 6092191 6093259 ZNF274 GTRD no Bone Marrow (K562) 21844577
chr19 6092191 6093259 ZNF274 GTRD no Bone Marrow (K562) 108377103
chr19 6092199 6093281 ZNF274 GTRD no Bone Marrow (K562) 21844580
chr19 6092199 6093281 ZNF274 GTRD no Bone Marrow (K562) 108377106
chr19 6092202 6093347 ZNF274 GTRD no Bone Marrow (K562) 21844581
chr19 6092202 6093347 ZNF274 GTRD no Bone Marrow (K562) 108377107
chr19 6092203 6093205 ZNF274 GTRD no Blood (GM12878) 108377108
chr19 6092206 6093164 ZNF274 GTRD no Bone Marrow (K562) 21844585
chr19 6092206 6093164 ZNF274 GTRD no Bone Marrow (K562) 108377112
chr19 6092236 6093179 TCF7L2 GTRD no Colon (HCT116) 21844595
chr19 6092236 6093179 TCF7L2 GTRD no Colon (HCT116) 108377122
chr19 6092256 6093096 ZNF274 GTRD no Bone Marrow (K562) 21844607
chr19 6092256 6093096 ZNF274 GTRD no Bone Marrow (K562) 108377134
chr19 6093050 6093060 RELA JASPAR yes 112256182
Genes associated with rs73549970[chr19:6093060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More