EnhancerDB
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  3. rs7417396[chr1:229002710]
Enhancers that have rs7417396[chr1:229002710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228982305 229013678 enh12753
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Astrocyte Lung (A549) Stomach Placenta Breast Uterus Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs7417396[chr1:229002710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229002314 229002872 ZNF143 GTRD no Epithelial (MCF-7) 21389131
chr1 229002692 229002712 RREB1 JASPAR yes 35938124
chr1 229002696 229002716 RREB1 JASPAR yes 35938126
chr1 229002699 229002719 RREB1 JASPAR yes 35938127
chr1 229002707 229002712 SP1 TRANSFAC yes 35938128
chr1 229002708 229002718 ZNF740 JASPAR yes 35938129
chr1 229002710 229002719 SP1 TRANSFAC yes 35938130
chr1 229002710 229002720 SP1 JASPAR yes 35938131
Genes associated with rs7417396[chr1:229002710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More