EnhancerDB
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  3. rs74178472[chr19:6110909]
Enhancers that have rs74178472[chr19:6110909]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74178472[chr19:6110909]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 21844682
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377225
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377226
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 21844690
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377247
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377248
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 21844740
chr19 6109734 6111754 TCF7L2 GTRD no Colon (HCT116) 108377374
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 21844741
chr19 6109802 6112024 TCF7L2 GTRD no Colon (HCT116) 108377375
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 21844742
chr19 6109821 6111773 TCF7L2 GTRD no Colon (HCT116) 108377376
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 21844743
chr19 6109829 6111741 ZNF143 GTRD no Epithelial (MCF-7) 108377377
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 21844744
chr19 6110015 6112007 ZNF274 GTRD no Bone Marrow (K562) 108377378
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 21844745
chr19 6110254 6111934 ZBTB33 GTRD no Lung (A549) 108377379
chr19 6110393 6111985 ZNF274 GTRD no Cervix (HeLa-S3) 21844746
chr19 6110393 6111985 ZNF274 GTRD no Cervix (HeLa-S3) 108377380
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 21844747
chr19 6110815 6112132 TCF7L2 GTRD no Colon (HCT116) 108377381
chr19 6110901 6110915 EBF1 JASPAR yes 112258866
Genes associated with rs74178472[chr19:6110909], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More