EnhancerDB
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  3. rs742559[chr1:210554623]
Enhancers that have rs742559[chr1:210554623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 210543485 210560329 enh27456
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs742559[chr1:210554623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 210554615 210554633 NR3C1 JASPAR yes 35024697
chr1 210554618 210554639 IRF1 JASPAR yes 35024698
chr1 210554620 210554635 FOXP1 JASPAR yes 35024699
chr1 210554623 210554641 IRF2 JASPAR yes 35024700
Genes associated with rs742559[chr1:210554623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More