EnhancerDB
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  3. rs74271009[chr2:28869962]
Enhancers that have rs74271009[chr2:28869962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs74271009[chr2:28869962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28869949 28869964 HNF1A JASPAR yes 72663668
chr2 28869950 28869963 HNF1B JASPAR yes 72663669
chr2 28869951 28869963 HNF1B JASPAR yes 72663670
chr2 28869953 28869963 EMX1 JASPAR yes 72663671
chr2 28869953 28869963 EMX2 JASPAR yes 72663672
chr2 28869953 28869963 ESX1 JASPAR yes 72663673
chr2 28869953 28869963 EVX1 JASPAR yes 72663674
chr2 28869953 28869963 EVX2 JASPAR yes 72663675
chr2 28869953 28869963 GBX2 JASPAR yes 72663676
chr2 28869953 28869963 HESX1 JASPAR yes 72663677
chr2 28869953 28869963 HOXA2 JASPAR yes 72663678
chr2 28869953 28869963 HOXB2 JASPAR yes 72663679
chr2 28869953 28869963 HOXB3 JASPAR yes 72663680
chr2 28869953 28869963 LHX2 JASPAR yes 72663681
chr2 28869953 28869963 LHX6 JASPAR yes 72663682
chr2 28869953 28869963 MEOX1 JASPAR yes 72663683
chr2 28869953 28869963 MEOX2 JASPAR yes 72663684
chr2 28869953 28869963 POU6F1 JASPAR yes 72663685
chr2 28869953 28869963 RAX JASPAR yes 72663686
chr2 28869954 28869962 LBX1 JASPAR yes 72663687
chr2 28869954 28869962 PDX1 JASPAR yes 72663688
chr2 28869954 28869962 VAX1 JASPAR yes 72663689
chr2 28869954 28869962 VAX2 JASPAR yes 72663690
chr2 28869954 28869962 VSX1 JASPAR yes 72663691
chr2 28869954 28869962 VSX2 JASPAR yes 72663692
chr2 28869954 28869964 POU6F2 JASPAR yes 72663693
chr2 28869959 28869974 PRDM1 JASPAR yes 72663694
chr2 28869962 28869983 ZNF263 JASPAR yes 72663695
Genes associated with rs74271009[chr2:28869962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More