EnhancerDB
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  3. rs74652636[chr1:54768054]
Enhancers that have rs74652636[chr1:54768054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs74652636[chr1:54768054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54768048 54768058 SREBF1 JASPAR yes 28970689
chr1 54768048 54768058 SREBF2 JASPAR yes 28970690
Genes associated with rs74652636[chr1:54768054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 54411750 54433841 + LRRC42 ENSG00000116212.10 54411750 334213 Lung 0.0604597 720