EnhancerDB
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  3. rs74783836[chr17:49016246]
Enhancers that have rs74783836[chr17:49016246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 49015225 49039275 enh17224
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs74783836[chr17:49016246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771342
chr17 49014272 49017787 ZNF143 GTRD no Epithelial (MCF-7) 21771343
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771360
chr17 49015169 49017460 ZNF143 GTRD no Epithelial (MCF-7) 21771361
chr17 49015271 49017444 ZNF143 GTRD no Epithelial (MCF-7) 21771363
chr17 49015459 49016298 ZNF143 GTRD no Epithelial (MCF-7) 21771364
chr17 49015471 49016310 ZNF143 GTRD no Epithelial (MCF-7) 21771365
chr17 49015654 49016252 ZNF143 GTRD no Epithelial (MCF-7) 21771366
chr17 49015983 49017186 ZNF143 GTRD no Epithelial (MCF-7) 21771371
chr17 49016012 49016355 ZNF274 GTRD no Blood (GM12878) 21771372
chr17 49016212 49017338 ZNF143 GTRD no Epithelial (MCF-7) 21771373
chr17 49016235 49016248 NFKB1 JASPAR yes 54736510
chr17 49016235 49016248 NFKB2 JASPAR yes 54736511
chr17 49016237 49016247 NFKB1 JASPAR yes 54736512
Genes associated with rs74783836[chr17:49016246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 48260650 48278993 - COL1A1 ENSG00000108821.9 48278993 737253 Uterus 0.129684 16029
chr17 49254786 49337524 - MBTD1 ENSG00000011258.11 49337524 238540 Lung 0.145956 16051