EnhancerDB
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  3. rs7488678[chr12:50954193]
Enhancers that have rs7488678[chr12:50954193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7488678[chr12:50954193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50954177 50954198 IRF1 JASPAR yes 120843897
chr12 50954178 50954193 FOXP1 JASPAR yes 120843898
chr12 50954181 50954196 STAT2 JASPAR yes 120843899
chr12 50954183 50954204 IRF1 JASPAR yes 120843900
Genes associated with rs7488678[chr12:50954193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More