EnhancerDB
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  3. rs75164054[chr1:204058811]
Enhancers that have rs75164054[chr1:204058811]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75164054[chr1:204058811]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 21370127
chr1 204056945 204058865 TCF7L2 GTRD no Colon (HCT116) 107859594
chr1 204058803 204058816 TFAP2A JASPAR yes 34678301
chr1 204058803 204058816 TFAP2B JASPAR yes 34678302
chr1 204058803 204058816 TFAP2C JASPAR yes 34678303
chr1 204058803 204058818 TFAP2C JASPAR yes 34678304
chr1 204058806 204058817 GCM1 JASPAR yes 34678305
chr1 204058808 204058817 THAP1 JASPAR yes 34678306
chr1 204058811 204058815 LFA1 TRANSFAC yes 34678307
Genes associated with rs75164054[chr1:204058811], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More