EnhancerDB
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  3. rs7520677[chr1:94791198]
Enhancers that have rs7520677[chr1:94791198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94779785 94813175 enh12071
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7520677[chr1:94791198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94791188 94791209 IRF1 JASPAR yes 30873479
chr1 94791192 94791204 IRF1 JASPAR yes 30873480
chr1 94791192 94791207 IRF9 JASPAR yes 30873481
Genes associated with rs7520677[chr1:94791198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 95582894 95663163 + TMEM56 ENSG00000152078.5 95582894 791696 Esophagus 0.178359 917