EnhancerDB
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  3. rs7522002[chr1:95258355]
Enhancers that have rs7522002[chr1:95258355]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95258204 95258621 vista2573
VISTA
Transcript factors that have rs7522002[chr1:95258355]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95257529 95258417 ZNF274 GTRD no Bone Marrow (K562) 107815981
chr1 95257589 95258509 ZNF274 GTRD no Liver (HepG2) 107815983
chr1 95257664 95258424 ZNF274 GTRD no Bone Marrow (K562) 107815988
chr1 95257685 95258469 ZNF274 GTRD no Bone Marrow (K562) 107815990
chr1 95257685 95258493 ZNF274 GTRD no Bone Marrow (K562) 107815991
chr1 95257752 95258370 ZNF274 GTRD no Bone Marrow (K562) 107815993
chr1 95257911 95258461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815998
chr1 95257936 95258532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107815999
chr1 95257960 95258415 CTCF UCSC Txn Factor no Conserved 107816000
chr1 95257995 95258355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816002
chr1 95258034 95258430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816003
chr1 95258042 95258372 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816004
chr1 95258058 95258428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816007
chr1 95258072 95258592 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816010
chr1 95258346 95258358 IRF1 JASPAR yes 30916728
chr1 95258346 95258358 IRF1 JASPAR yes 118333961
Genes associated with rs7522002[chr1:95258355], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 95285898 95360802 + SLC44A3 ENSG00000143036.12 95285898 27543 Spleen 0.116057 914