EnhancerDB
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  3. rs752340[chr19:13276345]
Enhancers that have rs752340[chr19:13276345]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs752340[chr19:13276345]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13275829 13276690 TCF7L2 GTRD no Colon (HCT116) 21851095
chr19 13275889 13276690 ZNF274 GTRD no Blood (GM12878) 21851096
chr19 13275983 13276499 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851097
chr19 13276066 13276596 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851100
chr19 13276263 13276673 ZNF143 GTRD no Epithelial (MCF-7) 21851101
chr19 13276270 13276615 ZNF143 GTRD no Epithelial (MCF-7) 21851102
chr19 13276336 13276349 ELF3 JASPAR yes 112514551
chr19 13276337 13276347 ETV6 JASPAR yes 112514552
chr19 13276337 13276347 GABPA JASPAR yes 112514553
chr19 13276337 13276348 ELF5 JASPAR yes 112514554
chr19 13276337 13276349 EHF JASPAR yes 112514555
chr19 13276337 13276349 ELF1 JASPAR yes 112514556
chr19 13276339 13276345 ETS1 JASPAR yes 112514557
chr19 13276339 13276345 SPI1 JASPAR yes 112514558
Genes associated with rs752340[chr19:13276345], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More