EnhancerDB
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  3. rs75273003[chr19:13144590]
Enhancers that have rs75273003[chr19:13144590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13138760 13157647 enh17929
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75273003[chr19:13144590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13143925 13144920 TCF7L2 GTRD no Colon (HCT116) 21850223
chr19 13143925 13144920 TCF7L2 GTRD no Colon (HCT116) 108387575
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 21850224
chr19 13143942 13144975 ZNF143 GTRD no Epithelial (MCF-7) 108387576
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 21850225
chr19 13144034 13145543 TCF7L2 GTRD no Colon (HCT116) 108387577
chr19 13144039 13144886 ZNF143 GTRD no Epithelial (MCF-7) 21850226
chr19 13144039 13144886 ZNF143 GTRD no Epithelial (MCF-7) 108387578
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 21850227
chr19 13144064 13145064 TCF7L2 GTRD no Colon (HCT116) 108387579
chr19 13144089 13144889 TCF7L2 GTRD no Colon (HCT116) 21850228
chr19 13144089 13144889 TCF7L2 GTRD no Colon (HCT116) 108387580
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 21850229
chr19 13144122 13145006 ZNF143 GTRD no Epithelial (MCF-7) 108387581
chr19 13144130 13144850 ZNF143 GTRD no Epithelial (MCF-7) 21850230
chr19 13144130 13144850 ZNF143 GTRD no Epithelial (MCF-7) 108387582
chr19 13144280 13144884 ZNF274 GTRD no Blood (GM12878) 108387583
chr19 13144568 13145023 ZNF274 GTRD no Bone Marrow (K562) 108387584
chr19 13144580 13144590 SREBF2 JASPAR yes 112502995
chr19 13144585 13144599 POU1F1 JASPAR yes 112502996
chr19 13144586 13144598 POU3F1 JASPAR yes 112502997
chr19 13144586 13144598 POU3F2 JASPAR yes 112502998
chr19 13144586 13144599 POU3F3 JASPAR yes 112502999
chr19 13144588 13144597 POU3F4 JASPAR yes 112503000
Genes associated with rs75273003[chr19:13144590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More