EnhancerDB
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  3. rs75339878[chr12:50988139]
Enhancers that have rs75339878[chr12:50988139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50971777 51003055 enh2348
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs75339878[chr12:50988139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50988127 50988141 RXRB JASPAR yes 120849346
chr12 50988127 50988141 RXRG JASPAR yes 120849347
chr12 50988129 50988145 SOX4 JASPAR yes 120849348
chr12 50988131 50988145 BATF3 JASPAR yes 120849349
Genes associated with rs75339878[chr12:50988139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More